clusterEx

clusterEX is a software package that contains several options to analyse gene expression data. It offers extended functionality compared to the public clusterEX server and faster and easier access. Its functions include:

-- Identification of hits from microarray experiments with up to three replicates and two conditions.
-- Clustering of these hits based on included Co-Expression databases for the most widely used model organisms used e.g. in Papsdorf et at. (2016), Eckl et al. (2021), Sima et al. (2016).
-- A modul to generate new Co-Expression databases for other organisms based on microarray experiments available e.g. from the GEO repository used in Sima et al. (2019) and Eckl et al. (2021).
-- An option to generate any networks based on CoExpression databases with input genes.
-- A clique separation module to cut networks into the most prominent cluster.
-- Statistical tools to calculate enrichments within the networks used in Sima et al. (2019) and Eckl et al. (2021).
-- Tools to translate the networks or clusters or CoExpression databases to other names or name types.

Based on these modules the entire analysis method of gene expression experiments is accelerated and a statistically sound basis is formed.

Different license types are available and all updates during the license time are included. The standard procedure will be to obtain an executable version of the software by pressing the "Proceed" button. Upon starting the software you will be directed to the license page, where the relevant information about the used computer is already entered. After paying via PayPal the button for "Get License" will be active and the license file will be obtained by pressing that button.

The starting date of the license for the requested computer is immediately.